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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs200724498 chr5:148526632 T/TTCTC HTN1 chr4:70916119-70924562:+ 1.04 7.69 4.01E-10 Box Plot
ACC rs200834993 chr3:69196796 G/A PRHOXNB chr13:28552243-28562774:- -0.67 -8.15 7.41E-11 Box Plot
ACC rs200845413 chr2:195450140 C/CG AES chr19:3052908-3063105:- -0.91 -7.51 7.62E-10 Box Plot
ACC rs201294740 chr3:116134114 GC/G OR6C3 chr12:55725485-55726420:+ 1 9.25 1.45E-12 Box Plot
ACC rs201324828 chr5:120325555 A/T GAGE2D chrX:49207160-49214420:+ 1.03 9.53 5.4E-13 Box Plot
ACC rs201505893 chr18:37003685 GC/G PRHOXNB chr13:28552243-28562774:- 0.61 7.99 1.34E-10 Box Plot
ACC rs201600079 chr18:37092048 GGAA/G PRHOXNB chr13:28552243-28562774:- 0.71 9.2 1.73E-12 Box Plot
ACC rs202039373 chr1:116265888 T/TATC TFDP3 chrX:132350697-132352376:- 0.92 8.08 9.37E-11 Box Plot
ACC rs2033210 chr6:13553565 G/A PRHOXNB chr13:28552243-28562774:- 0.53 7.7 3.81E-10 Box Plot
ACC rs2033211 chr6:13553485 A/G PRHOXNB chr13:28552243-28562774:- 0.53 7.7 3.81E-10 Box Plot
ACC rs2047588 chr5:71578902 A/G GDPD5 chr11:75145685-75236948:- 0.78 7.79 2.75E-10 Box Plot
ACC rs2053885 chr4:17545134 A/G GC chr4:72607410-72669758:- 0.81 11.17 1.97E-15 Box Plot
ACC rs2108826 chr17:32521852 T/C TFDP3 chrX:132350697-132352376:- 0.99 8.59 1.52E-11 Box Plot
ACC rs2122241 chr2:142868864 T/C PRHOXNB chr13:28552243-28562774:- 0.57 7.64 4.79E-10 Box Plot
ACC rs212661 chr7:18760372 G/A TFDP3 chrX:132350697-132352376:- 1.02 7.7 3.78E-10 Box Plot